STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
immp2lMitochondrial inner membrane protease subunit. (177 aa)    
Predicted Functional Partners:
immp1l
Mitochondrial inner membrane protease subunit.
  
 
0.878
spcs2
Signal peptidase complex subunit 2.
   
 0.868
spcs1
Signal peptidase complex subunit 1.
   
 0.862
spcs3
Signal peptidase complex subunit 3.
   
 0.862
ndufaf6
NADH:ubiquinone oxidoreductase complex assembly factor 6.
  
  
 0.762
itfg2
Integrin alpha FG-GAP repeat containing 2.
 
  
 
 0.735
LOC103464606
Kelch repeat and BTB (POZ) domain containing 12.
   
  
 0.726
gfm2
Ribosome-releasing factor 2, mitochondrial; Mitochondrial GTPase that mediates the disassembly of ribosomes from messenger RNA at the termination of mitochondrial protein biosynthesis. Acts in collaboration with MRRF. GTP hydrolysis follows the ribosome disassembly and probably occurs on the ribosome large subunit. Not involved in the GTP-dependent ribosomal translocation step during translation elongation; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
  
  
 0.699
spg7
SPG7 matrix AAA peptidase subunit, paraplegin.
   
 
 0.683
btbd9
BTB (POZ) domain containing 9.
      
 0.665
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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