STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
skap2Src kinase associated phosphoprotein 2. (349 aa)    
Predicted Functional Partners:
TATDN3
TatD DNase domain containing 3.
      
 0.647
tax1bp1
Tax1 (human T-cell leukemia virus type I) binding protein 1b.
      
 0.643
top2b
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.
      
 0.550
klhl6
Kelch-like family member 6.
   
  
 0.543
cpvl
Carboxypeptidase vitellogenic like; Belongs to the peptidase S10 family.
   
  
 0.532
ENSPREP00000005213
Uncharacterized protein.
   
 0.531
c8b
Complement component 8, beta polypeptide.
   
 0.531
LOC103478981
DAB adaptor protein 1b.
   
 0.531
ENSPREP00000030224
PID domain-containing protein.
   
 0.531
dab1
DAB adaptor protein 1a.
   
 0.531
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.