STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103456786Retinol dehydrogenase 12, like; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (298 aa)    
Predicted Functional Partners:
LOC103482193
Cytochrome P450, family 26, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family.
   
 
 0.923
aldh1a3
Aldehyde dehydrogenase 1 family, member A3; Belongs to the aldehyde dehydrogenase family.
  
 0.922
aldh1a2
Aldehyde dehydrogenase 1 family, member A2; Belongs to the aldehyde dehydrogenase family.
  
 0.922
LOC103461994
Cytochrome P450, family 27, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family.
   
 
  0.914
pnpla4
PNPLA domain-containing protein.
   
 
 0.910
aox1
Uncharacterized protein.
     
 0.908
LOC103468165
Uncharacterized protein.
    
 0.694
ENSPREP00000013371
Uncharacterized protein.
    
 0.694
RETSAT
Retinol saturase.
    
 0.694
LOC103481656
Si:ch1073-13h15.3.
    
 0.694
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.