STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
miosMissing oocyte, meiosis regulator, homolog (Drosophila). (867 aa)    
Predicted Functional Partners:
nprl2
NPR2 like, GATOR1 complex subunit.
    
 0.999
wdr59
WD repeat domain 59.
    
0.999
depdc5
DEP domain containing 5.
   
 0.999
seh1l
SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.
    
 0.999
sec13
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
    
 0.999
wdr24
WD repeat domain 24.
    
 0.999
Nprl3
NPR3-like, GATOR1 complex subunit.
    
 0.994
kptn
Kaptin (actin binding protein).
    
 0.985
LOC103475719
Ras-related GTP binding A.
    
 0.978
LOC103472311
Sestrin 2.
    
 0.972
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.