STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stk17bSerine/threonine kinase 17b (apoptosis-inducing); Belongs to the protein kinase superfamily. (346 aa)    
Predicted Functional Partners:
ENSPREP00000027477
Uncharacterized protein.
 
  
   0.870
ENSPREP00000027539
Uncharacterized protein.
 
  
   0.825
ENSPREP00000027601
Uncharacterized protein.
 
  
   0.811
ENSPREP00000025971
Uncharacterized protein.
 
  
   0.807
ENSPREP00000026351
Uncharacterized protein.
 
  
   0.734
ENSPREP00000026229
Uncharacterized protein.
 
  
   0.720
ENSPREP00000030194
Protein kinase domain-containing protein.
 
  
  
0.639
Kalrn
Kalirin RhoGEF kinase a.
 
  
   0.635
Trio
Trio Rho guanine nucleotide exchange factor a.
 
  
   0.633
ENSPREP00000027384
Uncharacterized protein.
 
  
   0.612
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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