STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
c6Complement component 6. (937 aa)    
Predicted Functional Partners:
c5
Anaphylatoxin-like domain-containing protein.
   
 0.999
c7
Complement component 7a.
   
 
0.999
c9
Complement component 9.
   
0.998
C8A
Complement C8 alpha chain.
   
 
0.995
LOC103482421
Complement component 8, gamma polypeptide; Belongs to the calycin superfamily. Lipocalin family.
   
 0.995
c8b
Complement component 8, beta polypeptide.
   
 
0.930
LOC103463360
Uncharacterized protein.
   
  
 0.699
LOC103480967
Uncharacterized protein; Belongs to the peptidase S1 family.
   
  
 0.670
LOC103474953
Uncharacterized protein.
   
 0.617
LOC103474285
Uncharacterized protein.
   
 0.617
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.