STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ankrd6Ankyrin repeat domain 6. (768 aa)    
Predicted Functional Partners:
ENSPREP00000004657
Amyloid beta (A4) precursor protein-binding, family B, member 3.
    
 0.849
PRICKLE1
Prickle homolog 1a.
   
 0.645
LOC103459444
Prickle homolog 1b.
   
 0.645
LOC103467536
Prickle homolog 2a.
   
 0.645
prickle2
Prickle homolog 2b.
   
 0.645
ikbkb
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.626
LOC103476976
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.626
LOC103467721
Prickle homolog 3.
   
 0.623
relb
V-rel avian reticuloendotheliosis viral oncogene homolog B.
   
 0.622
rel
REL proto-oncogene, NF-kB subunit.
   
 0.622
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.