STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
svoplSVOP-like. (566 aa)    
Predicted Functional Partners:
mfsd10
Major facilitator superfamily domain containing 10.
   
  
 0.566
mfsd9
Major facilitator superfamily domain containing 9.
   
  
 0.554
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
   
  
 0.552
r3hcc1
R3H domain and coiled-coil containing 1.
      
 0.549
coq9
Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration.
      
 0.549
unc93a
Unc-93 homolog A.
      
 0.549
mfsd13a
Major facilitator superfamily domain containing 13A.
      
 0.534
unc93b1
Unc-93 homolog B1, TLR signaling regulator.
      
 0.531
nat9
N-acetyltransferase 9 (GCN5-related, putative).
      
 0.477
LOC103475791
Solute carrier family 25 member 35; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.470
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.