STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttf2Uncharacterized protein. (1028 aa)    
Predicted Functional Partners:
rec114
REC114 meiotic recombination protein.
  
 
 0.968
pnkp
Polynucleotide kinase 3'-phosphatase.
  
 
 0.968
psph
Phosphoserine phosphatase.
  
  
 0.871
pigl
Phosphatidylinositol glycan anchor biosynthesis, class L.
    
  0.851
rad50
RAD50 homolog, double strand break repair protein.
    
  0.846
fh
Fumarate hydratase.
   
 
 0.842
cs
Citrate synthase; Belongs to the citrate synthase family.
    
 0.820
impa1
Inositol-1-monophosphatase.
  
 
 0.804
LOC103456804
Inositol-1-monophosphatase.
  
 
 0.804
LOC103461595
Uncharacterized protein.
  
 
 0.804
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.