STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000001809Uncharacterized protein. (172 aa)    
Predicted Functional Partners:
ENSPREP00000019813
AAA_6 domain-containing protein.
 
   0.953
ENSPREP00000032345
AAA_6 domain-containing protein.
 
   0.953
ENSPREP00000001882
Uncharacterized protein.
 
     0.950
ENSPREP00000025873
AAA_6 domain-containing protein.
 
     0.945
Dnah3
AAA_6 domain-containing protein.
 
     0.941
ENSPREP00000025896
AAA_6 domain-containing protein.
 
     0.938
ENSPREP00000001777
Uncharacterized protein.
 
      0.899
ENSPREP00000001898
Dynein_C domain-containing protein.
 
     0.833
Dnah1
Uncharacterized protein.
 
     0.755
dnai1
Dynein, axonemal, intermediate chain 1, paralog 2.
  
 0.632
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.