STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cdc14aUncharacterized protein. (135 aa)    
Predicted Functional Partners:
FZR1
Fizzy/cell division cycle 20 related 1a.
   
 0.954
LOC103479248
Uncharacterized protein.
  
  
 
0.904
LOC103470128
Cell division cycle 14B.
  
  
 
0.903
LOC103479019
Fizzy/cell division cycle 20 related 1b.
   
 0.821
cdc6
Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.
   
 
 0.811
CDC25B
Cell division cycle 25B.
   
 
 0.795
cdc23
CDC23 (cell division cycle 23, yeast, homolog).
     
 0.761
cdc20
Cell division cycle 20 homolog.
   
 0.758
intu
Inturned planar cell polarity protein.
   
 0.758
nrde2
NRDE-2, necessary for RNA interference, domain containing.
    
 
 0.755
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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