STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lin9Lin-9 DREAM MuvB core complex component. (542 aa)    
Predicted Functional Partners:
lin52
Lin-52 DREAM MuvB core complex component.
    
 0.997
lin54
Lin-54 DREAM MuvB core complex component.
   
 0.995
lin37
Lin-37 DREAM MuvB core complex component.
    
 0.985
rbbp4
Retinoblastoma binding protein 4.
    
 0.950
RBBP7
RB binding protein 7, chromatin remodeling factor.
    
 0.950
wdr73
WD repeat domain 73.
    
 0.946
LOC103468022
Uncharacterized protein.
    
 0.942
mybl2
V-myb avian myeloblastosis viral oncogene homolog-like 2b.
    
 0.942
ENSPREP00000023356
Retinoblastoma-like 1 (p107).
   
 0.899
LOC103466787
Retinoblastoma-like 2 (p130).
   
 0.899
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.