STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000001825RING-CH-type domain-containing protein. (923 aa)    
Predicted Functional Partners:
sqle
Squalene epoxidase a.
    
 
 0.865
ube2g2
Ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast).
    
 
 0.854
ube2j2
Ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog, yeast).
    
 
 0.826
rapgef2
Rap guanine nucleotide exchange factor (GEF) 2.
      
 0.778
cmbl
Carboxymethylenebutenolidase homolog (Pseudomonas).
      
 0.752
stard7
StAR-related lipid transfer (START) domain containing 7.
      
 0.724
amfr
Autocrine motility factor receptor b.
    
 
 0.714
syvn1
Synovial apoptosis inhibitor 1, synoviolin.
    
 
 0.714
c1qtnf12
C1q and TNF related 12.
    
 
 0.692
ropn1l
Rhophilin associated tail protein 1-like.
 
    
 0.687
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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