STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000001826Si:dkeyp-123h10.2. (535 aa)    
Predicted Functional Partners:
LOC103470482
Survival of motor neuron 1, telomeric.
      
 0.590
ENSPREP00000015022
Si:dkey-73n10.1.
  
     0.470
DCLK2
Doublecortin like kinase 2.
      
 0.451
LOC103480876
Uncharacterized protein.
      
 0.451
dclk3
Doublecortin-like kinase 3.
      
 0.451
GNAZ
G protein subunit alpha z.
      
 0.449
LOC103470674
General transcription factor IIH subunit.
      
 0.432
ENSPREP00000007673
ASD1 domain-containing protein.
  
     0.413
LOC103464927
Solute carrier family 48 member 1b.
      
 0.401
slc48a1
Solute carrier family 48 member 1a.
      
 0.401
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.