STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000001834Cnn_1N domain-containing protein. (307 aa)    
Predicted Functional Partners:
cdk5rap2
Uncharacterized protein.
 
    
 0.909
cenpj
Centromere protein J.
    
 
 0.865
plk4
Polo-like kinase 4 (Drosophila).
   
 0.704
tubg1
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 
 0.644
ckap5
Cytoskeleton associated protein 5.
    
 
 0.602
cep135
Centrosomal protein 135.
    
 
 0.600
sass6
SAS-6 centriolar assembly protein.
    
 
 0.574
PLK1
Serine/threonine-protein kinase PLK.
   
 0.568
plk3
Serine/threonine-protein kinase PLK.
   
 0.568
plk2
Serine/threonine-protein kinase PLK.
   
 0.568
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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