STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
traddTnfrsf1a-associated via death domain. (271 aa)    
Predicted Functional Partners:
ENSPREP00000002275
DED domain-containing protein.
   
 0.999
LOC103479635
Death domain-containing protein.
    
 0.999
tnfrsf1a
Tumor necrosis factor receptor superfamily, member 1a.
    
 0.999
LOC103478931
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.996
LOC103459939
Caspase 10, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
   
 0.996
LOC103473816
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.995
LOC103469572
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.993
traf3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.990
LOC103478932
Caspase 20, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
   
 0.987
LOC108167062
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.987
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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