STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000001881T-box transcription factor 2a. (572 aa)    
Predicted Functional Partners:
wnt3a
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
    
 0.546
nppa
Natriuretic peptide A.
    
 0.530
bmp4
Bone morphogenetic protein 4.
    
 0.519
gata4
GATA binding protein 4.
    
 0.518
kntc1
Kinetochore associated 1.
      
 0.496
hand2
Heart and neural crest derivatives expressed 2.
    
 0.472
nkx2-5
NK2 homeobox 5.
   
 0.469
LOC103464879
Fork-head domain-containing protein.
    
 
 0.441
ENSPREP00000005118
Uncharacterized protein.
    
 
 0.441
prox1
Prospero homeobox 1a.
      
 0.440
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.