STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000001888Complement component 7b. (572 aa)    
Predicted Functional Partners:
c6
Complement component 6.
  
  
0.562
c7
Complement component 7a.
  
  
 
0.560
C8A
Complement C8 alpha chain.
     
0.549
c8b
Complement component 8, beta polypeptide.
     
 
0.540
c9
Complement component 9.
     
 
0.540
F2r
Coagulation factor II (thrombin) receptor; Belongs to the G-protein coupled receptor 1 family.
      
 0.510
LOC103482421
Complement component 8, gamma polypeptide; Belongs to the calycin superfamily. Lipocalin family.
     
 0.493
aurka
Aurora kinase A; Belongs to the protein kinase superfamily.
      
 0.406
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.