STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000001898Dynein_C domain-containing protein. (85 aa)    
Predicted Functional Partners:
ENSPREP00000001882
Uncharacterized protein.
 
     0.930
ENSPREP00000001809
Uncharacterized protein.
 
     0.833
Dnah1
Uncharacterized protein.
 
     0.772
dnali1
Dynein, axonemal, light intermediate chain 1.
  
 
 0.723
Dnah3
AAA_6 domain-containing protein.
 
     0.692
ENSPREP00000001777
Uncharacterized protein.
 
      0.680
ENSPREP00000032328
Uncharacterized protein.
 
   0.629
rsph3
Radial spoke head 3.
  
 
 0.610
efhc1
EF-hand domain (C-terminal) containing 1.
  
 
 0.597
dctn2
Dynactin 2 (p50).
    
 0.595
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.