STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103475880Protein phosphatase, Mg2+/Mn2+ dependent, 1Db. (562 aa)    
Predicted Functional Partners:
PPM1D
Protein phosphatase, Mg2+/Mn2+ dependent 1D.
  
  
 
0.903
cbfb
Core-binding factor subunit beta.
     
 0.651
chek2
Checkpoint kinase 2.
    
 
 0.582
runx3
Runt-related transcription factor.
    
 0.523
LOC103457845
Runt-related transcription factor.
    
 0.523
LOC103477443
Runt-related transcription factor.
    
 0.523
mtfmt
Mitochondrial methionyl-tRNA formyltransferase.
  
   0.508
traf7
TNF receptor-associated factor 7.
   
 0.482
LOC103476608
Runt domain-containing protein.
    
 0.481
bckdhb
Branched chain keto acid dehydrogenase E1 subunit beta.
   
 0.480
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.