STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
acbd3Acyl-Coenzyme A binding domain containing 3. (514 aa)    
Predicted Functional Partners:
blzf1
Basic leucine zipper nuclear factor 1.
    
 
 0.945
LOC103467065
TBC1 domain family, member 22B.
    
 
 0.872
tbc1d22a
TBC1 domain family, member 22a.
    
 
 0.872
LOC103477466
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.820
Pi4kb
PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.820
cttn
Cortactin.
    
 0.807
LOC103459100
Hematopoietic cell-specific Lyn substrate 1.
    
 0.807
golgb1
Golgin B1.
    
 0.807
eprs1
Glutamyl-prolyl-tRNA synthetase.
   
  
 0.765
gbf1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
      
 0.758
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.