STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000001923Ig-like domain-containing protein. (197 aa)    
Predicted Functional Partners:
LOC103475898
Roundabout guidance receptor 1.
 
      0.891
LOC103471805
Slit homolog 3 (Drosophila).
   
 0.731
slit2
Slit homolog 2 (Drosophila).
   
 0.684
slit1
Slit homolog 1a (Drosophila).
   
 0.684
LOC103470154
Slit homolog 1b (Drosophila).
   
 0.684
nyx
Nyctalopin.
   
 0.660
abl1
Tyrosine-protein kinase.
   
 0.562
abl2
Tyrosine-protein kinase.
   
 0.562
nrp1
Neuropilin; Belongs to the neuropilin family.
     
 0.540
bsg
Basigin.
     
  0.478
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.