STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103459281Transducin beta like 1 X-linked. (513 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 0.966
LOC103479069
Transducin (beta)-like 1 X-linked receptor 1b.
  
  
 
0.948
TBL1XR1
Transducin beta like 1 X-linked receptor 1.
  
  
 
0.948
LOC103472282
Uncharacterized protein.
   
  0.934
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.934
apc2
APC regulator of WNT signaling pathway 2.
    
  0.906
ENSPREP00000004470
Uncharacterized protein.
   
 0.906
apc
APC regulator of WNT signaling pathway.
    
  0.906
gps2
G protein pathway suppressor 2.
   
 0.881
ncor2
Nuclear receptor corepressor 2.
   
 0.840
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.