STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103459281Transducin beta like 1 X-linked. (513 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 0.947
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.940
LOC103479069
Transducin (beta)-like 1 X-linked receptor 1b.
  
  
 
0.938
TBL1XR1
Transducin beta like 1 X-linked receptor 1.
  
  
 
0.938
LOC103472282
Uncharacterized protein.
   
 0.929
apc2
APC regulator of WNT signaling pathway 2.
    
  0.900
apc
APC regulator of WNT signaling pathway.
    
  0.900
ENSPREP00000004470
Uncharacterized protein.
   
 0.839
Kmt2e
Lysine (K)-specific methyltransferase 2E.
    
 
 0.834
ncor2
Nuclear receptor corepressor 2.
   
 0.832
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.