STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zbtb8aZinc finger and BTB domain containing 8A. (475 aa)    
Predicted Functional Partners:
LOC103479424
MID1 interacting protein 1a.
      
 0.667
znf276
Zinc finger protein 276.
    
   0.646
zbtb8os
Zinc finger and BTB domain containing 8 opposite strand.
    
 
 0.606
hic1
Hypermethylated in cancer 1.
    
   0.533
hic2
Hypermethylated in cancer 2.
    
   0.533
usf3
Upstream transcription factor family member 3.
  
     0.477
ENSPREP00000029558
Uncharacterized protein.
  
 
   0.440
ENSPREP00000023264
Si:dkey-165a24.9; Belongs to the G-protein coupled receptor 1 family.
  
 
  0.431
LOC103456580
Uncharacterized protein.
  
 
  0.426
mysm1
Myb-like, SWIRM and MPN domains 1.
    
  0.424
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.