STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103474024Si:ch211-22d5.2; Belongs to the protein kinase superfamily. (419 aa)    
Predicted Functional Partners:
ENSPREP00000000839
Protein kinase, AMP-activated, beta 1 non-catalytic subunit, a.
    
 0.562
PRKAB2
Protein kinase AMP-activated non-catalytic subunit beta 2.
    
 0.562
LOC103469702
Protein kinase, AMP-activated, beta 1 non-catalytic subunit, b.
    
 0.562
rptor
Regulatory associated protein of MTOR, complex 1.
    
 0.554
LOC103479581
Protein kinase, AMP-activated, gamma 2 non-catalytic subunit b.
   
 0.529
LOC103475605
Protein kinase, AMP-activated, gamma 3a non-catalytic subunit.
   
 0.529
LOC103460160
Uncharacterized protein.
   
 0.529
prkag1
Protein kinase, AMP-activated, gamma 1 non-catalytic subunit.
   
 0.529
LOC103482256
Protein kinase, AMP-activated, gamma 3b non-catalytic subunit.
   
 0.529
tsc2
TSC complex subunit 2.
    
 0.515
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.