STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nhsl1NHS-like 1b. (1628 aa)    
Predicted Functional Partners:
ENSPREP00000032937
SH3 domain-containing protein.
    
 
 0.921
BRK1
BRICK1 subunit of SCAR/WAVE actin nucleating complex.
    
 
 0.888
AMZ2
Archaelysin family metallopeptidase 2.
    
   0.739
nck2
Cytoplasmic protein.
    
   0.738
nck1
Cytoplasmic protein.
    
   0.738
nckap1
NCK-associated protein 1.
    
 
 0.732
nckap1l
NCK associated protein 1 like.
    
 
 0.732
ABI1
Abl-interactor 1a.
    
 
 0.575
ENSPREP00000003699
SH3 domain-containing protein.
    
 
 0.575
ENSPREP00000003717
Uncharacterized protein.
    
 
 0.575
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.