STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103468035BPI fold containing family C, like. (509 aa)    
Predicted Functional Partners:
ENSPREP00000033412
Peptidase S1 domain-containing protein.
      
 0.626
apof
Apolipoprotein F.
     
 0.478
c9
Complement component 9.
      
 0.475
LOC103472833
Guanine nucleotide binding protein (G protein), beta polypeptide 3b.
      
 0.472
LOC103477850
Uncharacterized protein.
   
 0.440
LOC103477849
Uncharacterized protein.
   
 0.440
LOC103474828
Apolipoprotein A-Ib.
   
 0.440
arl13b
ADP-ribosylation factor-like 13b.
     
 0.416
arl13a
ADP-ribosylation factor-like 13A.
     
 0.416
arfrp1
ADP-ribosylation factor related protein 1.
     
 0.416
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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