STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103468036Aa_trans domain-containing protein. (512 aa)    
Predicted Functional Partners:
ENSPREP00000014713
Aa_trans domain-containing protein.
  
  
 
0.902
slc32a1
Solute carrier family 32 member 1.
  
  
 
0.900
gad2
Glutamate decarboxylase 2.
   
 
 0.810
LOC103472577
Uncharacterized protein.
   
 
 0.698
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.698
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.683
LOC103467654
Synaptotagmin IIa.
   
 
 0.612
SYT2
Synaptotagmin 2.
   
 
 0.612
LOC103481238
Synaptotagmin Vb.
   
 
 0.612
syt1
Synaptotagmin Ia.
   
 
 0.612
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.