STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JAZF1JAZF zinc finger 1b. (241 aa)    
Predicted Functional Partners:
sympk
Symplekin.
    
 
 0.799
wdr82
WD repeat domain 82.
    
 
 0.689
LOC103465138
Uncharacterized protein.
    
 
 0.689
ENSPREP00000007025
Uncharacterized protein.
    
 
 0.658
ssu72
SSU72 homolog, RNA polymerase II CTD phosphatase.
    
 
 0.658
tmem240
Transmembrane protein 240a.
    
 
 0.658
meaf6
MYST/Esa1-associated factor 6.
    
 
 0.630
ENSPREP00000022903
Uncharacterized protein.
   
 
 0.617
Trrap
FATC domain-containing protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.617
nr2c1
Nuclear receptor subfamily 2, group C, member 1.
    
 
 0.611
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.