STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
ppiePeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (301 aa)    
Predicted Functional Partners:
aqr
Aquarius intron-binding spliceosomal factor.
    
 0.998
ZNF830
Zinc finger protein 830.
    
 0.998
crnkl1
Crooked neck pre-mRNA splicing factor 1.
   
 0.998
prpf19
Pre-mRNA processing factor 19.
   
 0.997
rbm22
RNA binding motif protein 22.
   
 0.997
bud31
BUD31 homolog.
   
  0.997
xab2
XPA binding protein 2.
   
 0.996
LOC103460347
ISY1 splicing factor homolog.
   
  0.995
snw1
SNW domain containing 1.
   
 0.995
syf2
SYF2 pre-mRNA-splicing factor.
    
 0.972
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.