STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103459922Guanylate cyclase activator 1d. (178 aa)    
Predicted Functional Partners:
gpatch3
G patch domain containing 3.
      
 0.602
ENSPREP00000001490
Si:dkey-44k1.5.
   
 0.598
cngb1
Cyclic nucleotide gated channel beta 1a.
   
 0.598
LOC103482329
Cyclic nucleotide gated channel beta 3, tandem duplicate 1.
   
 0.598
LOC103482304
Cyclic nucleotide gated channel beta 3, tandem duplicate 2.
   
 0.598
ENSPREP00000001575
Uncharacterized protein.
      
 0.597
guca1a
Guanylate cyclase activator 1A.
     
  0.580
pde6g
Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog a.
   
  
 0.578
LOC103457654
Lebercilin LCA5.
   
  
 0.578
fam161a
FAM161 centrosomal protein A.
    
 0.553
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.