STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpvlCarboxypeptidase vitellogenic like; Belongs to the peptidase S10 family. (489 aa)    
Predicted Functional Partners:
neu1
Neuraminidase 1.
   
 0.614
espl1
Extra spindle pole bodies like 1, separase.
      
 0.549
skap2
Src kinase associated phosphoprotein 2.
   
  
 0.532
LOC103474771
Beta-galactosidase.
   
 0.501
LOC103474770
Beta-galactosidase.
   
 0.501
LOC103476132
Beta-galactosidase.
   
 0.501
glb1
Beta-galactosidase.
   
 0.471
ENSPREP00000011523
Uncharacterized protein.
   
 0.471
LOC103461671
Galactosidase, beta 1-like; Belongs to the glycosyl hydrolase 35 family.
   
 0.471
bod1l1
Uncharacterized protein.
   
 0.471
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.