STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cpvlCarboxypeptidase vitellogenic like; Belongs to the peptidase S10 family. (489 aa)    
Predicted Functional Partners:
capzb
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
   
   0.803
ENSPREP00000006896
2-epi-5-epi-valiolone synthase.
    
   0.791
LOC103469671
Tumor suppressor candidate 3.
    
 
 0.750
ENSPREP00000014381
Magnesium transporter 1.
    
 
 0.750
alg5
ALG5 dolichyl-phosphate beta-glucosyltransferase.
   
   0.743
dctn2
Dynactin 2 (p50).
    
   0.729
neu1
Neuraminidase 1.
   
 0.683
has1
Hyaluronan synthase 1.
    
 
 0.671
has2
Hyaluronan synthase 2.
    
 
 0.671
has3
Hyaluronan synthase 3.
    
 
 0.671
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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