STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103464946Discs, large (Drosophila) homolog-associated protein 4b. (1197 aa)    
Predicted Functional Partners:
ccnb3
Cyclin B3; Belongs to the cyclin family.
   
  
 0.906
LOC103466031
SH3 and multiple ankyrin repeat domains 3a.
  
 0.839
Shank1
SAM domain-containing protein.
  
 0.831
shank1
SH3 and multiple ankyrin repeat domains 1.
   
 0.795
LOC103463007
SH3 and multiple ankyrin repeat domains 2a.
   
 0.795
LOC103481054
Uncharacterized protein.
   
 0.795
commd7
COMM domain containing 7.
      
 0.758
ENSPREP00000008137
PDZ domain-containing protein.
   
 0.757
dclre1b
DNA cross-link repair 1B.
      
 0.730
LOC103460621
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.713
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.