STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Gfod2GFO_IDH_MocA domain-containing protein. (96 aa)    
Predicted Functional Partners:
pyroxd1
Pyridine nucleotide-disulphide oxidoreductase domain 1.
  
  
 0.930
ralgapb
Ral GTPase activating protein, beta subunit (non-catalytic).
    
   0.656
ENSPREP00000023043
Uncharacterized protein.
    
   0.656
tbccd1
TBCC domain containing 1.
      
 0.617
rgn
Regucalcin.
  
 
 0.612
icmt
Protein-S-isoprenylcysteine O-methyltransferase.
     
 0.608
gins1
GINS complex subunit 1 (Psf1 homolog).
      
 0.599
bckdhb
Branched chain keto acid dehydrogenase E1 subunit beta.
   
  
 0.594
crtam
Uncharacterized protein.
      
 0.589
LOC103479319
Nicotinamide-nucleotide adenylyltransferase.
   
 
 0.581
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.