STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103466861Uncharacterized protein. (420 aa)    
Predicted Functional Partners:
ncor2
Nuclear receptor corepressor 2.
    
 0.649
ncor1
Nuclear receptor corepressor 1.
    
 0.649
TADA1
Transcriptional adaptor 1.
    
 0.643
LOC103478548
Retinoid x receptor, beta b.
   
 0.638
RXRB
Retinoid X receptor beta.
   
 0.638
LOC103463575
Uncharacterized protein.
   
 0.638
Rxra
Retinoid X receptor, alpha a.
   
 0.638
fgf23
Fibroblast growth factor 23; Belongs to the heparin-binding growth factors family.
   
 
 0.624
LOC103477707
Nuclear receptor subfamily 1, group D, member 2a.
   
 0.608
LOC103471958
Nuclear receptor subfamily 1, group D, member 2b.
   
 0.608
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.