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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103474675J domain-containing protein. (54 aa)    
Predicted Functional Partners:
cdc5l
CDC5 cell division cycle 5-like (S. pombe).
    
 
 0.568
HSP90AA1
Heat shock protein 90 alpha family class A member 1.
      
 0.526
wdr53
WD repeat domain 53.
   
  
 0.487
gtf2ird1
GTF2I repeat domain containing 1.
      
 0.473
ppp5c
Serine/threonine-protein phosphatase.
      
 0.473
bcl7b
BAF chromatin remodeling complex subunit BCL7B b.
      
 0.473
ENSPREP00000020758
One cut domain family member.
      
 0.472
ndufa7
NADH:ubiquinone oxidoreductase subunit A7.
   
 
 0.470
spata22
Spermatogenesis associated 22.
      
 0.426
gak
Cyclin G associated kinase.
    
 
 0.424
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.