STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Chst3Sulfotransferase; Belongs to the sulfotransferase 1 family. (434 aa)    
Predicted Functional Partners:
chst7
Sulfotransferase; Belongs to the sulfotransferase 1 family.
   
0.916
LOC103476849
Sulfotransferase; Belongs to the sulfotransferase 1 family.
  
  
 
0.902
lum
Lumican.
     
 0.668
DSEL
Dermatan sulfate epimerase like a.
      
 0.635
chst12
Carbohydrate sulfotransferase.
      
 0.597
dse
Dermatan sulfate epimerase.
      
 0.596
LOC103459205
Keratocan.
     
 0.589
csgalnact2
Hexosyltransferase.
      
 0.531
chsy1
Hexosyltransferase.
      
 0.503
CHST15
Carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15.
      
 0.503
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.