STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zdhhc1Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (537 aa)    
Predicted Functional Partners:
ENSPREP00000005404
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 0.915
tbk1
TANK-binding kinase 1.
    
 0.915
ENSPREP00000031073
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
  
  
 
0.904
sting1
Transmembrane protein 173.
     
 0.813
zdhhc24
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.579
zdhhc22
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.575
abhd10
Transgelin 3b.
   
  
 0.507
ppt1
Palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile).
      
 0.503
abhd13
Abhydrolase domain containing 13.
      
 0.503
zdhhc21
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.498
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.