STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THUMPD2THUMP domain containing 2. (418 aa)    
Predicted Functional Partners:
eprs1
Glutamyl-prolyl-tRNA synthetase.
  
  
 0.613
nus1
NUS1 dehydrodolichyl diphosphate synthase subunit.
   
    0.593
dhdds
Alkyl transferase; Belongs to the UPP synthase family.
   
    0.593
pus10
Pseudouridine synthase 10.
      
 0.549
PNPT1
Polyribonucleotide nucleotidyltransferase 1.
  
    0.538
apmap
Adipocyte plasma membrane associated protein.
  
    0.538
LOC103459097
Zgc:194209.
  
    0.538
yrdc
YrdC N(6)-threonylcarbamoyltransferase domain containing.
      
 0.531
ttc5
Tetratricopeptide repeat domain 5.
  
    0.525
ctps1
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
  
    0.525
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.