Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LOC103475870 | LOC103479097 | ENSPREP00000002220 | ENSPREP00000010509 | Nucleophosmin 1a. | Uncharacterized protein. | 0.902 |
| LOC103475870 | RBBP7 | ENSPREP00000002220 | ENSPREP00000032935 | Nucleophosmin 1a. | RB binding protein 7, chromatin remodeling factor. | 0.696 |
| LOC103475870 | RPL5 | ENSPREP00000002220 | ENSPREP00000011806 | Nucleophosmin 1a. | Ribosomal protein L5. | 0.730 |
| LOC103475870 | RPL5-2 | ENSPREP00000002220 | ENSPREP00000020679 | Nucleophosmin 1a. | Ribosomal protein L5b. | 0.730 |
| LOC103475870 | eef1g | ENSPREP00000002220 | ENSPREP00000024562 | Nucleophosmin 1a. | Eukaryotic translation elongation factor 1 gamma. | 0.663 |
| LOC103475870 | parp1 | ENSPREP00000002220 | ENSPREP00000001596 | Nucleophosmin 1a. | Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. | 0.729 |
| LOC103475870 | rbbp4 | ENSPREP00000002220 | ENSPREP00000032501 | Nucleophosmin 1a. | Retinoblastoma binding protein 4. | 0.696 |
| LOC103475870 | rcc1l | ENSPREP00000002220 | ENSPREP00000021243 | Nucleophosmin 1a. | RCC1 like. | 0.681 |
| LOC103475870 | ruvbl1 | ENSPREP00000002220 | ENSPREP00000018143 | Nucleophosmin 1a. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.682 |
| LOC103475870 | tp53 | ENSPREP00000002220 | ENSPREP00000019676 | Nucleophosmin 1a. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.730 |
| LOC103479097 | LOC103475870 | ENSPREP00000010509 | ENSPREP00000002220 | Uncharacterized protein. | Nucleophosmin 1a. | 0.902 |
| LOC103479097 | RPL5 | ENSPREP00000010509 | ENSPREP00000011806 | Uncharacterized protein. | Ribosomal protein L5. | 0.486 |
| LOC103479097 | RPL5-2 | ENSPREP00000010509 | ENSPREP00000020679 | Uncharacterized protein. | Ribosomal protein L5b. | 0.486 |
| LOC103479097 | parp1 | ENSPREP00000010509 | ENSPREP00000001596 | Uncharacterized protein. | Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. | 0.436 |
| LOC103479097 | tp53 | ENSPREP00000010509 | ENSPREP00000019676 | Uncharacterized protein. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.587 |
| RBBP7 | LOC103475870 | ENSPREP00000032935 | ENSPREP00000002220 | RB binding protein 7, chromatin remodeling factor. | Nucleophosmin 1a. | 0.696 |
| RBBP7 | rbbp4 | ENSPREP00000032935 | ENSPREP00000032501 | RB binding protein 7, chromatin remodeling factor. | Retinoblastoma binding protein 4. | 0.900 |
| RBBP7 | ruvbl1 | ENSPREP00000032935 | ENSPREP00000018143 | RB binding protein 7, chromatin remodeling factor. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.771 |
| RBBP7 | tp53 | ENSPREP00000032935 | ENSPREP00000019676 | RB binding protein 7, chromatin remodeling factor. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.413 |
| RPL5 | LOC103475870 | ENSPREP00000011806 | ENSPREP00000002220 | Ribosomal protein L5. | Nucleophosmin 1a. | 0.730 |
page 1 of 3