STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103466248TEA domain family member 1a. (428 aa)    
Predicted Functional Partners:
yap1
Yes-associated protein 1.
   
 0.927
LOC103458622
Insulinoma-associated 1b.
    
 
 0.780
vgll2
Vestigial-like family member 2a.
    
 
 0.728
LOC103467586
Vestigial-like family member 4a.
    
 
 0.677
LOC103460975
Vestigial-like family member 4b.
    
 
 0.677
Vgll1
Uncharacterized protein.
    
 
 0.610
nek4
NIMA-related kinase 4.
   
  
 0.580
prkra
Protein kinase, interferon-inducible double stranded RNA dependent activator.
      
 0.574
snrnp70
Small nuclear ribonucleoprotein 70 (U1).
      
 0.560
LOC103470615
Vestigial like 4 like.
    
 
 0.550
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.