STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rnlsRenalase, FAD-dependent amine oxidase. (349 aa)    
Predicted Functional Partners:
nadk
NAD kinase a.
     
  0.684
LOC103479795
NAD kinase b.
     
  0.684
nit1
Nitrilase 1.
      
 0.601
mfsd6l
Major facilitator superfamily domain containing 6-like.
      
 0.582
mrps18a
Mitochondrial ribosomal protein S18A.
      
 0.580
LOC103476963
Amino_oxidase domain-containing protein.
      
 0.580
ppox
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
      
 0.571
maob
Amine oxidase.
      
 0.551
ENSPREP00000032699
Amine oxidase.
      
 0.551
ccdc59
Coiled-coil domain containing 59.
      
 0.546
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.