STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103473438Potassium channel, subfamily T, member 1. (1286 aa)    
Predicted Functional Partners:
dym
Dymeclin.
      
 0.577
clg5h3orf67
Zgc:162324.
      
 0.451
KCNMB4
Potassium calcium-activated channel subfamily M regulatory beta subunit 4.
     
 0.436
pmpca
Peptidase (mitochondrial processing) alpha.
    
 
 0.416
caskin1
CASK interacting protein 1.
   
 
 0.416
surf6
Surfeit 6.
      
 0.409
ubac1
UBA domain containing 1.
      
 0.406
surf4
Surfeit 4.
      
 0.403
sptan1
Spectrin alpha, non-erythrocytic 1.
      
 0.402
LOC103469771
Zinc finger protein 703.
      
 0.402
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.