STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103477705Uncharacterized protein. (469 aa)    
Predicted Functional Partners:
nrip1
Nuclear receptor interacting protein 1b.
    
 0.705
ncor2
Nuclear receptor corepressor 2.
    
 0.652
ncor1
Nuclear receptor corepressor 1.
    
 0.652
LOC103478548
Retinoid x receptor, beta b.
   
 0.624
RXRB
Retinoid X receptor beta.
   
 0.624
LOC103463575
Uncharacterized protein.
   
 0.624
Rxra
Retinoid X receptor, alpha a.
   
 0.624
LOC103467472
Nuclear receptor coactivator 6.
   
 0.613
psmc5
Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.
    
  0.590
ube2i
Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.561
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.