STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103475868Neuroligin 2b. (865 aa)    
Predicted Functional Partners:
LOC103481553
Uncharacterized protein.
   
 0.869
nrxn1
Neurexin 1b.
   
 0.869
LOC103458986
Uncharacterized protein.
   
 0.867
LOC103457817
Neurexin 3b.
   
 0.867
wdr43
WD repeat domain 43.
   
 0.595
ENSPREP00000004629
Syndecan domain-containing protein.
   
 0.591
LOC103475455
Uncharacterized protein.
   
 0.591
LOC103480212
Uncharacterized protein.
   
 0.591
dlg4
Discs, large homolog 4a (Drosophila); Belongs to the MAGUK family.
    
 0.576
utp4
UTP4 small subunit processome component.
   
 0.564
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.