STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plekha8Pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8. (565 aa)    
Predicted Functional Partners:
mnat1
CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex.
      
 0.550
tmtc4
Transmembrane O-mannosyltransferase targeting cadherins 4.
      
 0.549
trip4
Thyroid hormone receptor interactor 4.
      
 0.549
gpatch3
G patch domain containing 3.
   
  
 0.530
NEK9
NIMA related kinase 9.
      
 0.529
rspry1
Ring finger and SPRY domain containing 1.
      
 0.525
arf4
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 0.520
arf4-2
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 0.520
LOC103459372
ADP ribosylation factor 5; Belongs to the small GTPase superfamily. Arf family.
   
 0.520
LOC103481611
ADP-ribosylation factor 2b; Belongs to the small GTPase superfamily. Arf family.
   
 0.520
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.