STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103462554Calbindin 2b. (271 aa)    
Predicted Functional Partners:
LOC103475843
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
 0.661
cask
Uncharacterized protein; Belongs to the MAGUK family.
   
 0.661
ENSPREP00000027150
Uncharacterized protein.
   
 0.564
LOC103475296
Somatostatin.
   
  
 0.560
dcx
Uncharacterized protein.
     
 0.555
nts
Neurotensin.
      
 0.549
LOC103468547
Parvalbumin 6; Belongs to the parvalbumin family.
      
 0.549
sdf4
Stromal cell derived factor 4.
      
 0.549
LOC103478176
Protein S100; Belongs to the S-100 family.
    
 0.541
rgs7
Regulator of G protein signaling 7a.
   
  
 0.532
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.