STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
kcnh8Potassium voltage-gated channel, subfamily H (eag-related), member 8. (1035 aa)    
Predicted Functional Partners:
kcnab2
Potassium voltage-gated channel subfamily A regulatory beta subunit 2.
    
 0.517
LOC103479385
Potassium voltage-gated channel, shaker-related subfamily, beta member 1 b.
    
 0.517
KCNAB1
Potassium voltage-gated channel subfamily A member regulatory beta subunit 1.
    
 0.517
KCNAB3
Potassium voltage-gated channel subfamily A regulatory beta subunit 3.
    
 0.517
kcng1
Potassium voltage-gated channel, subfamily G, member 1; Belongs to the potassium channel family.
   
 
 0.495
fbxl15
F-box and leucine-rich repeat protein 15.
   
  
 0.486
SLITRK1
SLIT and NTRK like family member 1.
      
 0.481
kcnf1
Potassium voltage-gated channel, subfamily F, member 1b; Belongs to the potassium channel family.
   
 
 0.475
ENSPREP00000009708
Potassium voltage-gated channel, subfamily F, member 1a; Belongs to the potassium channel family.
   
 
 0.475
fkbp14
Peptidylprolyl isomerase.
      
 0.473
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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