STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103462555Carboxypeptidase; Belongs to the peptidase S10 family. (466 aa)    
Predicted Functional Partners:
neu1
Neuraminidase 1.
   
 0.937
glb1
Beta-galactosidase.
   
 0.890
LOC103461671
Galactosidase, beta 1-like; Belongs to the glycosyl hydrolase 35 family.
   
 0.868
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
    
 
 0.697
os9
OS9 endoplasmic reticulum lectin.
   
 
 0.653
erlec1
Endoplasmic reticulum lectin 1.
   
 
 0.653
pebp1
Phosphatidylethanolamine binding protein 1.
   
 
 0.630
LOC103474668
Sialidase 4.
    
 0.628
ctsc
Cathepsin C; Belongs to the peptidase C1 family.
   
 0.620
amfr
Autocrine motility factor receptor b.
    
 
 0.612
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.