STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103462555Carboxypeptidase; Belongs to the peptidase S10 family. (466 aa)    
Predicted Functional Partners:
glb1
Beta-galactosidase.
   
 0.806
LOC103461671
Galactosidase, beta 1-like; Belongs to the glycosyl hydrolase 35 family.
   
 0.806
neu1
Neuraminidase 1.
   
 0.744
pebp1
Phosphatidylethanolamine binding protein 1.
   
 
 0.650
LOC103474668
Sialidase 4.
    
 0.646
os9
OS9 endoplasmic reticulum lectin.
   
 
 0.549
erlec1
Endoplasmic reticulum lectin 1.
   
 
 0.549
LOC103474771
Beta-galactosidase.
   
 0.533
LOC103474770
Beta-galactosidase.
   
 0.533
ENSPREP00000011523
Uncharacterized protein.
   
 0.533
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.