STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103478563Collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase. (455 aa)    
Predicted Functional Partners:
DOK7
Docking protein 7.
      
 0.656
musk
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.622
rapsn
Receptor-associated protein of the synapse, 43kD.
      
 0.598
LOC103475776
Cholinergic receptor, nicotinic, epsilon.
    
 
 0.595
plod1
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a.
   
 0.594
plod2
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2.
   
 0.594
ache
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
    
 
 0.558
LOC103459627
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
    
 
 0.553
bche
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
    
 
 0.553
hacl1
2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family.
 
      0.544
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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